J3_8RCM_012
3D structure
- PDB id
- 8RCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (Non-rotated disome interface class 2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.59 Å
Loop
- Sequence
- CUUG*CGGAG*CGUUAAG
- Length
- 16 nucleotides
- Bulged bases
- 8RCM|1|A1|U|871
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8RCM_012 not in the Motif Atlas
- Homologous match to J3_5J7L_004
- Geometric discrepancy: 0.1302
- The information below is about J3_5J7L_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_85054.4
- Basepair signature
- cWW-tWW-tHS-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
8RCM|1|A1|C|826
8RCM|1|A1|U|827
8RCM|1|A1|U|828
8RCM|1|A1|G|829
*
8RCM|1|A1|C|857
8RCM|1|A1|G|858
8RCM|1|A1|G|859
8RCM|1|A1|A|860
8RCM|1|A1|G|861
*
8RCM|1|A1|C|868
8RCM|1|A1|G|869
8RCM|1|A1|U|870
8RCM|1|A1|U|871
8RCM|1|A1|A|872
8RCM|1|A1|A|873
8RCM|1|A1|G|874
Current chains
- Chain A1
- 16S ribosomal RNA
Nearby chains
- Chain B
- Small ribosomal subunit protein uS2
- Chain H1
- Small ribosomal subunit protein uS8
- Chain U1
- 30S ribosomal protein S21
Coloring options: