J3_8RCS_037

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

GGGACG*CC*GAAAAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8RCS_037 not in the Motif Atlas

Homologous match to J3_5J7L_069

Geometric discrepancy: 0.0777

The information below is about J3_5J7L_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_34864.2

Basepair signature

cWW-F-cWW-F-tHH-F-tHS-tHS-cWW

Number of instances in this motif group

4

Unit IDs

8RCS|1|72|G|1424
8RCS|1|72|G|1425
8RCS|1|72|G|1426
8RCS|1|72|A|1427
8RCS|1|72|C|1428
8RCS|1|72|G|1429
*
8RCS|1|72|C|1564
8RCS|1|72|C|1565
*
8RCS|1|72|G|1568
8RCS|1|72|A|1569
8RCS|1|72|A|1570
8RCS|1|72|A|1571
8RCS|1|72|A|1572
8RCS|1|72|G|1573
8RCS|1|72|C|1574

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain b2

50S ribosomal protein L2