3D structure

PDB id
8RCT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Escherichia coli paused disome complex (Rotated disome interface class 2)
Experimental method
ELECTRON MICROSCOPY
Resolution
5.32 Å

Loop

Sequence
GGA*UUUAAAG*CAC
Length
13 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_8RCT_003 not in the Motif Atlas
Homologous match to J3_6PRV_001
Geometric discrepancy: 0.1714
The information below is about J3_6PRV_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_28621.5
Basepair signature
cWW-tSS-cSS-tSH-cWW-cWW-tWW-F-F
Number of instances in this motif group
7

Unit IDs

8RCT|1|72|G|1055
8RCT|1|72|G|1056
8RCT|1|72|A|1057
*
8RCT|1|72|U|1081
8RCT|1|72|U|1082
8RCT|1|72|U|1083
8RCT|1|72|A|1084
8RCT|1|72|A|1085
8RCT|1|72|A|1086
8RCT|1|72|G|1087
*
8RCT|1|72|C|1102
8RCT|1|72|A|1103
8RCT|1|72|C|1104

Current chains

Chain 72
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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