J3_8RCT_005

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CAAG*CCCAAAC*GUG

Length

14 nucleotides

Bulged bases

8RCT|1|72|A|1609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8RCT_005 not in the Motif Atlas

Homologous match to J3_7A0S_007

Geometric discrepancy: 0.1234

The information below is about J3_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_71677.1

Basepair signature

cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW

Number of instances in this motif group

2

Unit IDs

8RCT|1|72|C|1306
8RCT|1|72|A|1307
8RCT|1|72|A|1308
8RCT|1|72|G|1309
*
8RCT|1|72|C|1605
8RCT|1|72|C|1606
8RCT|1|72|C|1607
8RCT|1|72|A|1608
8RCT|1|72|A|1609
8RCT|1|72|A|1610
8RCT|1|72|C|1611
*
8RCT|1|72|G|1620
8RCT|1|72|U|1621
8RCT|1|72|G|1622

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain l2

50S ribosomal protein L34