J3_8RG0_001
3D structure
- PDB id
- 8RG0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of human eIF3 core from closed 48S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AUUC*GGACCAGAG*CAUUU
- Length
- 18 nucleotides
- Bulged bases
- 8RG0|1|A|G|991
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8RG0_001 not in the Motif Atlas
- Homologous match to J3_8P9A_074
- Geometric discrepancy: 0.1502
- The information below is about J3_8P9A_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_23895.1
- Basepair signature
- cWW-cWW-cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8RG0|1|A|A|938
8RG0|1|A|U|939
8RG0|1|A|U|940
8RG0|1|A|C|941
*
8RG0|1|A|G|985
8RG0|1|A|G|986
8RG0|1|A|A|987
8RG0|1|A|C|988
8RG0|1|A|C|989
8RG0|1|A|A|990
8RG0|1|A|G|991
8RG0|1|A|A|992
8RG0|1|A|G|993
*
8RG0|1|A|C|1000
8RG0|1|A|A|1001
8RG0|1|A|U|1002
8RG0|1|A|U|1003
8RG0|1|A|U|1004
Current chains
- Chain A
- 18S rRNA
Nearby chains
- Chain I
- 40S ribosomal protein S13
- Chain O
- 40S ribosomal protein S3a
- Chain P
- 40S ribosomal protein S14
- Chain Q
- 40S ribosomal protein S26
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