J3_8UTI_030
3D structure
- PDB id
- 8UTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- AUCA*UAACUACUG*CAUUU
- Length
- 18 nucleotides
- Bulged bases
- 8UTI|1|E|C|934
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8UTI_030 not in the Motif Atlas
- Homologous match to J3_8P9A_074
- Geometric discrepancy: 0.1141
- The information below is about J3_8P9A_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_23895.1
- Basepair signature
- cWW-cWW-cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8UTI|1|E|A|881
8UTI|1|E|U|882
8UTI|1|E|C|883
8UTI|1|E|A|884
*
8UTI|1|E|U|928
8UTI|1|E|A|929
8UTI|1|E|A|930
8UTI|1|E|C|931
8UTI|1|E|U|932
8UTI|1|E|A|933
8UTI|1|E|C|934
8UTI|1|E|U|935
8UTI|1|E|G|936
*
8UTI|1|E|C|943
8UTI|1|E|A|944
8UTI|1|E|U|945
8UTI|1|E|U|946
8UTI|1|E|U|947
Current chains
- Chain E
- 18S rRNA
Nearby chains
- Chain Lr
- 60S ribosomal protein L43-A
- Chain SQ
- 40S ribosomal protein S1-A
- Chain SY
- 40S ribosomal protein S13
- Chain SZ
- 40S ribosomal protein S14-B
- Chain Se
- 40S ribosomal protein S26-B
Coloring options: