J3_8UZ3_025
3D structure
- PDB id
- 8UZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 8UZ3|1|2|A|975, 8UZ3|1|2|G|976, 8UZ3|1|2|A|977, 8UZ3|1|2|A|978, 8UZ3|1|2|U|1224
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8UZ3_025 not in the Motif Atlas
- Geometric match to J3_4LFB_004
- Geometric discrepancy: 0.2996
- The information below is about J3_4LFB_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_88451.1
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8UZ3|1|2|U|955
8UZ3|1|2|U|956
8UZ3|1|2|U|957
8UZ3|1|2|A|958
8UZ3|1|2|A|959
8UZ3|1|2|U|960
8UZ3|1|2|U|961
8UZ3|1|2|C|962
*
8UZ3|1|2|G|973
8UZ3|1|2|A|974
8UZ3|1|2|A|975
8UZ3|1|2|G|976
8UZ3|1|2|A|977
8UZ3|1|2|A|978
8UZ3|1|2|C|979
8UZ3|1|2|C|980
8UZ3|1|2|U|981
8UZ3|1|2|U|982
8UZ3|1|2|A|983
8UZ3|1|2|C|984
*
8UZ3|1|2|G|1221
8UZ3|1|2|G|1222
8UZ3|1|2|C|1223
8UZ3|1|2|U|1224
8UZ3|1|2|A|1225
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain o
- 30S ribosomal protein S10
- Chain r
- 30S ribosomal protein S13
- Chain s
- 30S ribosomal protein S14
- Chain x
- 30S ribosomal protein S19
Coloring options: