J3_8UZG_024

3D structure

PDB id

8UZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUUG*CGGAG*CGUUAAG

Length

16 nucleotides

Bulged bases

8UZG|1|2|U|871, 8UZG|1|2|A|873

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8UZG_024 not in the Motif Atlas

Geometric match to J3_5J7L_004

Geometric discrepancy: 0.1186

The information below is about J3_5J7L_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85054.4

Basepair signature

cWW-tWW-tHS-F-cWW-tHS-cWW-F

Number of instances in this motif group

3

Unit IDs

8UZG|1|2|C|826
8UZG|1|2|U|827
8UZG|1|2|U|828
8UZG|1|2|G|829
*
8UZG|1|2|C|857
8UZG|1|2|G|858
8UZG|1|2|G|859
8UZG|1|2|A|860
8UZG|1|2|G|861
*
8UZG|1|2|C|868
8UZG|1|2|G|869
8UZG|1|2|U|870
8UZG|1|2|U|871
8UZG|1|2|A|872
8UZG|1|2|A|873
8UZG|1|2|G|874

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S2

Chain m

30S ribosomal protein S8