J3_8UZG_029

3D structure

PDB id

8UZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

8UZG|1|2|U|1212

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8UZG_029 not in the Motif Atlas

Geometric match to J3_8B0X_029

Geometric discrepancy: 0.2332

The information below is about J3_8B0X_029

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_28881.1

Basepair signature

cWW-tWH-F-F-cWW-cWW-F-F-F-cWS-cWW

Number of instances in this motif group

2

Unit IDs

8UZG|1|2|C|990
8UZG|1|2|U|991
8UZG|1|2|U|992
8UZG|1|2|G|993
8UZG|1|2|A|994
8UZG|1|2|C|995
8UZG|1|2|A|996
8UZG|1|2|U|997
*
8UZG|1|2|A|1044
8UZG|1|2|C|1045
8UZG|1|2|A|1046
8UZG|1|2|G|1047
*
8UZG|1|2|C|1210
8UZG|1|2|U|1211
8UZG|1|2|U|1212
8UZG|1|2|A|1213
8UZG|1|2|C|1214
8UZG|1|2|G|1215

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain s

30S ribosomal protein S14