J3_8VFT_015

3D structure

PDB id

8VFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 80S rabbit ribosome stalled by emetine with eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

8VFT|1|5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VFT|1|5|A|2551
8VFT|1|5|G|2552
8VFT|1|5|A|2553
8VFT|1|5|U|2554
8VFT|1|5|G|2555
*
8VFT|1|5|C|2572
8VFT|1|5|A|2573
8VFT|1|5|G|2574
8VFT|1|5|U|2575
*
8VFT|1|5|A|2757
8VFT|1|5|G|2758
8VFT|1|5|G|2759
8VFT|1|5|G|2760
8VFT|1|5|U|2761
8VFT|1|5|G|2762
8VFT|1|5|U|2763
8VFT|1|5|A|2764
8VFT|1|5|A|2765
8VFT|1|5|A|2766
8VFT|1|5|U|2767

Current chains

Chain 5

28S rRNA

Nearby chains

Chain Z

eL27