J3_8VVQ_015

3D structure

PDB id

8VVQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

8VVQ|1|WA|U|2765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVQ|1|WA|A|2553
8VVQ|1|WA|G|2554
8VVQ|1|WA|A|2555
8VVQ|1|WA|U|2556
8VVQ|1|WA|G|2557
*
8VVQ|1|WA|C|2574
8VVQ|1|WA|A|2575
8VVQ|1|WA|G|2576
8VVQ|1|WA|U|2577
*
8VVQ|1|WA|A|2759
8VVQ|1|WA|G|2760
8VVQ|1|WA|G|2761
8VVQ|1|WA|G|2762
8VVQ|1|WA|U|2763
8VVQ|1|WA|G|2764
8VVQ|1|WA|U|2765
8VVQ|1|WA|A|2766
8VVQ|1|WA|A|2767
8VVQ|1|WA|A|2768
8VVQ|1|WA|U|2769

Current chains

Chain WA

28S rRNA

Nearby chains

Chain Y

L27