J3_8VVQ_037

3D structure

PDB id

8VVQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UCUUAG*CGAGAC*GCAAUA

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVQ|1|ZA|U|1340
8VVQ|1|ZA|C|1341
8VVQ|1|ZA|U|1342
8VVQ|1|ZA|U|1343
8VVQ|1|ZA|A|1344
8VVQ|1|ZA|G|1345
*
8VVQ|1|ZA|C|1384
8VVQ|1|ZA|G|1385
8VVQ|1|ZA|A|1386
8VVQ|1|ZA|G|1387
8VVQ|1|ZA|A|1388
8VVQ|1|ZA|C|1389
*
8VVQ|1|ZA|G|1481
8VVQ|1|ZA|C|1482
8VVQ|1|ZA|A|1483
8VVQ|1|ZA|A|1484
8VVQ|1|ZA|U|1485
8VVQ|1|ZA|A|1486

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain CB

S2-like

Chain DB

S3

Chain DC

uS14

Chain QB

uS9

Chain RB

eS17

Chain UB

uS10