J3_8VVV_033

3D structure

PDB id

8VVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the nonrotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUG*UUCCG*CAAAG

Length

13 nucleotides

Bulged bases

8VVV|1|9|C|1138, 8VVV|1|9|A|1150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVV|1|9|C|1094
8VVV|1|9|U|1095
8VVV|1|9|G|1096
*
8VVV|1|9|U|1136
8VVV|1|9|U|1137
8VVV|1|9|C|1138
8VVV|1|9|C|1139
8VVV|1|9|G|1140
*
8VVV|1|9|C|1147
8VVV|1|9|A|1148
8VVV|1|9|A|1149
8VVV|1|9|A|1150
8VVV|1|9|G|1151

Current chains

Chain 9

18S rRNA

Nearby chains

Chain AA

uS2

Chain VV

eS21

Chain WW

uS8

Chain aa

eS26

Chain bb

eS27