J3_8ZEJ_030
3D structure
- PDB id
- 8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- CUG*CUAAC*GGACAG
- Length
- 14 nucleotides
- Bulged bases
- 8ZEJ|1|b|A|2198
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8ZEJ_030 not in the Motif Atlas
- Geometric match to J3_5J7L_044
- Geometric discrepancy: 0.0772
- The information below is about J3_5J7L_044
- Detailed Annotation
- Kink-turn 3-way junction
- Broad Annotation
- No text annotation
- Motif group
- J3_89368.5
- Basepair signature
- cWW-tSH-tHW-F-cWW-tHH-cWW
- Number of instances in this motif group
- 3
Unit IDs
8ZEJ|1|b|C|2091
8ZEJ|1|b|U|2092
8ZEJ|1|b|G|2093
*
8ZEJ|1|b|C|2196
8ZEJ|1|b|U|2197
8ZEJ|1|b|A|2198
8ZEJ|1|b|A|2199
8ZEJ|1|b|C|2200
*
8ZEJ|1|b|G|2223
8ZEJ|1|b|G|2224
8ZEJ|1|b|A|2225
8ZEJ|1|b|C|2226
8ZEJ|1|b|A|2227
8ZEJ|1|b|G|2228
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L28
- Chain c
- 50S ribosomal protein L2
- Chain h
- 50S ribosomal protein L9
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