J3_8ZH3_036
3D structure
- PDB id
- 8ZH3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/P-P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CCAG*CUAGUAA*UGAUUACG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZH3|1|S2|C|1161
8ZH3|1|S2|C|1162
8ZH3|1|S2|A|1163
8ZH3|1|S2|G|1164
*
8ZH3|1|S2|C|1581
8ZH3|1|S2|U|1582
8ZH3|1|S2|A|1583
8ZH3|1|S2|G|1584
8ZH3|1|S2|U|1585
8ZH3|1|S2|A|1586
8ZH3|1|S2|A|1587
*
8ZH3|1|S2|U|1609
8ZH3|1|S2|G|1610
8ZH3|1|S2|A|1611
8ZH3|1|S2|U|1612
8ZH3|1|S2|U|1613
8ZH3|1|S2|A|1614
8ZH3|1|S2|C|1615
8ZH3|1|S2|G|1616
Current chains
- Chain S2
- chain 2 18S rRNA (1771-MER)
Nearby chains
- Chain SB
- Small ribosomal subunit protein uS7
- Chain SF
- Small ribosomal subunit protein uS9A
- Chain SL
- Small ribosomal subunit protein eS28A
Coloring options: