J3_9C3H_005

3D structure

PDB id

9C3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

9C3H|1|L5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C3H|1|L5|C|112
9C3H|1|L5|A|113
9C3H|1|L5|G|114
9C3H|1|L5|C|115
9C3H|1|L5|G|116
*
9C3H|1|L5|C|155
9C3H|1|L5|G|156
9C3H|1|L5|U|157
9C3H|1|L5|A|158
9C3H|1|L5|C|159
9C3H|1|L5|G|160
*
9C3H|1|L5|C|275
9C3H|1|L5|C|276
9C3H|1|L5|G|277
9C3H|1|L5|G|278

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LG

Large ribosomal subunit protein eL8

Chain LN

Large ribosomal subunit protein eL15

Chain LO

Large ribosomal subunit protein uL29

Chain LQ

Large ribosomal subunit protein eL13

Chain Li

Large ribosomal subunit protein eL36