J3_9C3H_016

3D structure

PDB id

9C3H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.

Experimental method

ELECTRON MICROSCOPY

Resolution

2 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

9C3H|1|L5|U|2763

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9C3H|1|L5|A|2551
9C3H|1|L5|G|2552
9C3H|1|L5|A|2553
9C3H|1|L5|U|2554
9C3H|1|L5|G|2555
*
9C3H|1|L5|C|2572
9C3H|1|L5|A|2573
9C3H|1|L5|G|2574
9C3H|1|L5|U|2575
*
9C3H|1|L5|A|2757
9C3H|1|L5|G|2758
9C3H|1|L5|G|2759
9C3H|1|L5|G|2760
9C3H|1|L5|U|2761
9C3H|1|L5|G|2762
9C3H|1|L5|U|2763
9C3H|1|L5|A|2764
9C3H|1|L5|A|2765
9C3H|1|L5|A|2766
9C3H|1|L5|U|2767

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LZ

Large ribosomal subunit protein eL27