J3_9E1S_013
3D structure
- PDB id
- 9E1S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- CAAG*CCCAAAC*GUG
- Length
- 14 nucleotides
- Bulged bases
- 9E1S|1|I|A|1844
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9E1S_013 not in the Motif Atlas
- Homologous match to J3_8B0X_019
- Geometric discrepancy: 0.1031
- The information below is about J3_8B0X_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47341.1
- Basepair signature
- cWW-tHH-F-tHW-tHS-tWW-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
9E1S|1|I|C|1437
9E1S|1|I|A|1438
9E1S|1|I|A|1439
9E1S|1|I|G|1440
*
9E1S|1|I|C|1840
9E1S|1|I|C|1841
9E1S|1|I|C|1842
9E1S|1|I|A|1843
9E1S|1|I|A|1844
9E1S|1|I|A|1845
9E1S|1|I|C|1846
*
9E1S|1|I|G|1855
9E1S|1|I|U|1856
9E1S|1|I|G|1857
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein bL34
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