J3_9E6Q_014
3D structure
- PDB id
- 9E6Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Pyrobaculum calidifontis 50S ribosomal subunit in complex with Dri
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.95 Å
Loop
- Sequence
- UUG*CUUAC*GGACAG
- Length
- 14 nucleotides
- Bulged bases
- 9E6Q|1|1|U|2317
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17460.1
- Basepair signature
- cWW-tHH-cWW-F-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
9E6Q|1|1|U|2211
9E6Q|1|1|U|2212
9E6Q|1|1|G|2213
*
9E6Q|1|1|C|2315
9E6Q|1|1|U|2316
9E6Q|1|1|U|2317
9E6Q|1|1|A|2318
9E6Q|1|1|C|2319
*
9E6Q|1|1|G|2334
9E6Q|1|1|G|2335
9E6Q|1|1|A|2336
9E6Q|1|1|C|2337
9E6Q|1|1|A|2338
9E6Q|1|1|G|2339
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain AA
- Large ribosomal subunit protein uL2
- Chain AM
- 50S ribosomal protein L15e
Coloring options: