J3_9EHO_009
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAG*CCACCAUC*GUC
- Length
- 15 nucleotides
- Bulged bases
- 9EHO|1|5|A|2641, 9EHO|1|5|U|2642
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|5|G|2159
9EHO|1|5|A|2160
9EHO|1|5|A|2161
9EHO|1|5|G|2162
*
9EHO|1|5|C|2636
9EHO|1|5|C|2637
9EHO|1|5|A|2638
9EHO|1|5|C|2639
9EHO|1|5|C|2640
9EHO|1|5|A|2641
9EHO|1|5|U|2642
9EHO|1|5|C|2643
*
9EHO|1|5|G|2652
9EHO|1|5|U|2653
9EHO|1|5|C|2654
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain g
- Large ribosomal subunit protein eL34
- Chain j
- Ribosomal protein L37
- Chain l
- Large ribosomal subunit protein eL39
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