J3_9F58_019
3D structure
- PDB id
- 9F58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Gcn2 dimer bound to the 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AUUG*CUUAUU*AAGACAUU
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9F58_019 not in the Motif Atlas
- Homologous match to J3_8CRE_019
- Geometric discrepancy: 0.206
- The information below is about J3_8CRE_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_84052.1
- Basepair signature
- cWW-F-F-F-F-cWW-F-tWH-tHS-F-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
9F58|1|a|A|2432
9F58|1|a|U|2433
9F58|1|a|U|2434
9F58|1|a|G|2435
*
9F58|1|a|C|2512
9F58|1|a|U|2513
9F58|1|a|U|2514
9F58|1|a|A|2515
9F58|1|a|U|2516
9F58|1|a|U|2517
*
9F58|1|a|A|2590
9F58|1|a|A|2591
9F58|1|a|G|2592
9F58|1|a|A|2593
9F58|1|a|C|2594
9F58|1|a|A|2595
9F58|1|a|U|2596
9F58|1|a|U|2597
Current chains
- Chain a
- 25S rRNA
Nearby chains
- Chain U
- 60S ribosomal protein L36-A
- Chain c
- 60S ribosomal protein L2-A
- Chain h
- 60S ribosomal protein L8-A
- Chain o
- 60S ribosomal protein L15-A
Coloring options: