J3_9G1Z_013
3D structure
- PDB id
- 9G1Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with mefloquine (non-rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAAGUG*CAA*UCUA
- Length
- 14 nucleotides
- Bulged bases
- 9G1Z|1|1|A|1478
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9G1Z_013 not in the Motif Atlas
- Homologous match to J3_8CRE_013
- Geometric discrepancy: 0.0524
- The information below is about J3_8CRE_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_19545.2
- Basepair signature
- cWW-F-F-tHS-cWW-cWW-F-F
- Number of instances in this motif group
- 6
Unit IDs
9G1Z|1|1|U|1475
9G1Z|1|1|G|1476
9G1Z|1|1|A|1477
9G1Z|1|1|A|1478
9G1Z|1|1|G|1479
9G1Z|1|1|U|1480
9G1Z|1|1|G|1481
*
9G1Z|1|1|C|1853
9G1Z|1|1|A|1854
9G1Z|1|1|A|1855
*
9G1Z|1|1|U|1867
9G1Z|1|1|C|1868
9G1Z|1|1|U|1869
9G1Z|1|1|A|1870
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AH
- Large ribosomal subunit protein eL34
- Chain z
- Ribosomal protein L19
Coloring options: