J3_9G6J_007
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- AGAC*GGG*CAUAAU
- Length
- 13 nucleotides
- Bulged bases
- 9G6J|1|1|U|618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9G6J_007 not in the Motif Atlas
- Homologous match to J3_8CRE_007
- Geometric discrepancy: 0.1261
- The information below is about J3_8CRE_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_28315.1
- Basepair signature
- cWW-F-F-F-F-cWW-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
9G6J|1|1|A|436
9G6J|1|1|G|437
9G6J|1|1|A|438
9G6J|1|1|C|439
*
9G6J|1|1|G|488
9G6J|1|1|G|489
9G6J|1|1|G|490
*
9G6J|1|1|C|616
9G6J|1|1|A|617
9G6J|1|1|U|618
9G6J|1|1|A|619
9G6J|1|1|A|620
9G6J|1|1|U|621
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AF
- Ribosomal 60S subunit protein L32
- Chain AG
- Ribosomal 60S subunit protein L33A
- Chain x
- Ribosomal 60S subunit protein L17B
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