J3_9GHF_026
3D structure
- PDB id
- 9GHF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CGGAAG*CAG*CAAG
- Length
- 13 nucleotides
- Bulged bases
- 9GHF|1|a|A|1302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9GHF_026 not in the Motif Atlas
- Homologous match to J3_5J7L_041
- Geometric discrepancy: 0.0576
- The information below is about J3_5J7L_041
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_32852.6
- Basepair signature
- cWW-tSH-F-F-F-cWW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
9GHF|1|a|C|1298
9GHF|1|a|G|1299
9GHF|1|a|G|1300
9GHF|1|a|A|1301
9GHF|1|a|A|1302
9GHF|1|a|G|1303
*
9GHF|1|a|C|1625
9GHF|1|a|A|1626
9GHF|1|a|G|1627
*
9GHF|1|a|C|1639
9GHF|1|a|A|1640
9GHF|1|a|A|1641
9GHF|1|a|G|1642
Current chains
- Chain a
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: