J3_9GMO_021
3D structure
- PDB id
- 9GMO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GUUG*CCUUC*GCACCGCACGUUC
- Length
- 22 nucleotides
- Bulged bases
- 9GMO|1|A|U|4882, 9GMO|1|A|A|4938, 9GMO|1|A|C|4940, 9GMO|1|A|A|4943, 9GMO|1|A|C|4944
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9GMO|1|A|G|4751
9GMO|1|A|U|4752
9GMO|1|A|U|4753
9GMO|1|A|G|4754
*
9GMO|1|A|C|4879
9GMO|1|A|C|4880
9GMO|1|A|U|4881
9GMO|1|A|U|4882
9GMO|1|A|C|4883
*
9GMO|1|A|G|4936
9GMO|1|A|C|4937
9GMO|1|A|A|4938
9GMO|1|A|C|4939
9GMO|1|A|C|4940
9GMO|1|A|G|4941
9GMO|1|A|C|4942
9GMO|1|A|A|4943
9GMO|1|A|C|4944
9GMO|1|A|G|4945
9GMO|1|A|U|4946
9GMO|1|A|U|4947
9GMO|1|A|C|4948
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain H
- Large ribosomal subunit protein eL6
- Chain I
- 60S ribosomal protein L13a
- Chain Z
- 60S ribosomal protein L35a
- Chain s
- 60S ribosomal protein L14
Coloring options: