J3_9GR1_028
3D structure
- PDB id
- 9GR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-TEC complex in delivery state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- GGGACG*CC*GAAAAGC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9GR1_028 not in the Motif Atlas
- Homologous match to J3_5J7L_069
- Geometric discrepancy: 0.0481
- The information below is about J3_5J7L_069
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_34864.2
- Basepair signature
- cWW-F-cWW-F-tHH-F-tHS-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
9GR1|1|a|G|1426
9GR1|1|a|G|1427
9GR1|1|a|G|1428
9GR1|1|a|A|1429
9GR1|1|a|C|1430
9GR1|1|a|G|1431
*
9GR1|1|a|C|1566
9GR1|1|a|C|1567
*
9GR1|1|a|G|1570
9GR1|1|a|A|1571
9GR1|1|a|A|1572
9GR1|1|a|A|1573
9GR1|1|a|A|1574
9GR1|1|a|G|1575
9GR1|1|a|C|1576
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain c
- 50S ribosomal protein L2
Coloring options: