J3_9H74_007

3D structure

PDB id

9H74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUC*GGACCAGAG*CAUUU

Length

18 nucleotides

Bulged bases

9H74|1|2|G|987

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H74|1|2|A|934
9H74|1|2|U|935
9H74|1|2|U|936
9H74|1|2|C|937
*
9H74|1|2|G|981
9H74|1|2|G|982
9H74|1|2|A|983
9H74|1|2|C|984
9H74|1|2|C|985
9H74|1|2|A|986
9H74|1|2|G|987
9H74|1|2|A|988
9H74|1|2|G|989
*
9H74|1|2|C|996
9H74|1|2|A|997
9H74|1|2|U|998
9H74|1|2|U|999
9H74|1|2|U|1000

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain D

40S ribosomal protein S3a

Chain P

40S ribosomal protein S13

Chain Q

40S ribosomal protein uS11

Chain b

40S ribosomal protein S26