J3_9H9M_004

3D structure

PDB id

9H9M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex 4 (HEAD) 30S-GE81112 (weak residual tRNA)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

9H9M|1|1|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H9M|1|1|C|990
9H9M|1|1|U|991
9H9M|1|1|U|992
9H9M|1|1|G|993
*
9H9M|1|1|C|1045
9H9M|1|1|A|1046
9H9M|1|1|G|1047
*
9H9M|1|1|C|1210
9H9M|1|1|U|1211
9H9M|1|1|U|1212
9H9M|1|1|A|1213
9H9M|1|1|C|1214
9H9M|1|1|G|1215

Current chains

Chain 1

16S RNA (1542-MER)

Nearby chains

Chain N

Small ribosomal subunit protein uS14