J3_9KMW_005
3D structure
- PDB id
- 9KMW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- SARSr-MpCoV-GX Nsp1 bound to the Human 40S Ribosomal subunit-State2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.73 Å
Loop
- Sequence
- CCG*UUCCG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 9KMW|1|2|C|1138, 9KMW|1|2|A|1150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9KMW|1|2|C|1094
9KMW|1|2|C|1095
9KMW|1|2|G|1096
*
9KMW|1|2|U|1136
9KMW|1|2|U|1137
9KMW|1|2|C|1138
9KMW|1|2|C|1139
9KMW|1|2|G|1140
*
9KMW|1|2|C|1147
9KMW|1|2|A|1148
9KMW|1|2|A|1149
9KMW|1|2|A|1150
9KMW|1|2|G|1151
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain A
- Small ribosomal subunit protein uS2
- Chain C
- Small ribosomal subunit protein uS5
- Chain V
- Small ribosomal subunit protein eS21
- Chain W
- Small ribosomal subunit protein uS8
- Chain a
- Small ribosomal subunit protein eS26
- Chain b
- Small ribosomal subunit protein eS27
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