J3_9MOR_027
3D structure
- PDB id
- 9MOR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Damaged 70S ribosome with PrfH bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- CGUCAG*CGCAACC*GAUGACG
- Length
- 20 nucleotides
- Bulged bases
- 9MOR|1|2|A|1067, 9MOR|1|2|U|1189
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9MOR_027 not in the Motif Atlas
- Homologous match to J3_6CZR_023
- Geometric discrepancy: 0.4564
- The information below is about J3_6CZR_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08394.2
- Basepair signature
- cWW-F-F-F-tHW-F-F-F-tSS-F-cWW-cWW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9MOR|1|2|C|1063
9MOR|1|2|G|1064
9MOR|1|2|U|1065
9MOR|1|2|C|1066
9MOR|1|2|A|1067
9MOR|1|2|G|1068
*
9MOR|1|2|C|1107
9MOR|1|2|G|1108
9MOR|1|2|C|1109
9MOR|1|2|A|1110
9MOR|1|2|A|1111
9MOR|1|2|C|1112
9MOR|1|2|C|1113
*
9MOR|1|2|G|1187
9MOR|1|2|A|1188
9MOR|1|2|U|1189
9MOR|1|2|G|1190
9MOR|1|2|A|1191
9MOR|1|2|C|1192
9MOR|1|2|G|1193
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain h
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S5
- Chain l
- 30S ribosomal protein S7
- Chain n
- Small ribosomal subunit protein uS9
- Chain o
- Small ribosomal subunit protein uS10
- Chain s
- Small ribosomal subunit protein uS14
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