J3_9N72_003

3D structure

PDB id

9N72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SSU processome maturation and disassembly, State F

Experimental method

ELECTRON MICROSCOPY

Resolution

5.94 Å

Loop

Sequence

AUCA*UAACUACUG*CAUUU

Length

18 nucleotides

Bulged bases

9N72|1|L1|C|934

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N72|1|L1|A|881
9N72|1|L1|U|882
9N72|1|L1|C|883
9N72|1|L1|A|884
*
9N72|1|L1|U|928
9N72|1|L1|A|929
9N72|1|L1|A|930
9N72|1|L1|C|931
9N72|1|L1|U|932
9N72|1|L1|A|933
9N72|1|L1|C|934
9N72|1|L1|U|935
9N72|1|L1|G|936
*
9N72|1|L1|C|943
9N72|1|L1|A|944
9N72|1|L1|U|945
9N72|1|L1|U|946
9N72|1|L1|U|947

Current chains

Chain L1

18S rRNA

Nearby chains

Chain LW

U3 small nucleolar RNA-associated protein 7

Chain NG

40S ribosomal protein S14-A

Chain NM

Small ribosomal subunit protein eS1A

Chain SW

Pre-rRNA-processing protein PNO1