J3_9N9J_001

3D structure

PDB id

9N9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a GRP94 folding intermediate engaged with a CCDC134- and FKBP11-bound secretory translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAGCG*CGUACG*CCGG

Length

15 nucleotides

Bulged bases

9N9J|1|L5|C|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9N9J|1|L5|C|112
9N9J|1|L5|A|113
9N9J|1|L5|G|114
9N9J|1|L5|C|115
9N9J|1|L5|G|116
*
9N9J|1|L5|C|155
9N9J|1|L5|G|156
9N9J|1|L5|U|157
9N9J|1|L5|A|158
9N9J|1|L5|C|159
9N9J|1|L5|G|160
*
9N9J|1|L5|C|275
9N9J|1|L5|C|276
9N9J|1|L5|G|277
9N9J|1|L5|G|278

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LG

Large ribosomal subunit protein eL8

Chain LL

Large ribosomal subunit protein eL13

Chain LN

Large ribosomal subunit protein eL15

Chain Lh

Large ribosomal subunit protein uL29

Chain Li

Large ribosomal subunit protein eL36