J3_9NDP_030

3D structure

PDB id

9NDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of stalled ribosome and nascent chain in complex with NMT2 and NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

AUUC*GGACCAGAG*CAUUU

Length

18 nucleotides

Bulged bases

9NDP|1|K|G|991

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9NDP|1|K|A|938
9NDP|1|K|U|939
9NDP|1|K|U|940
9NDP|1|K|C|941
*
9NDP|1|K|G|985
9NDP|1|K|G|986
9NDP|1|K|A|987
9NDP|1|K|C|988
9NDP|1|K|C|989
9NDP|1|K|A|990
9NDP|1|K|G|991
9NDP|1|K|A|992
9NDP|1|K|G|993
*
9NDP|1|K|C|1000
9NDP|1|K|A|1001
9NDP|1|K|U|1002
9NDP|1|K|U|1003
9NDP|1|K|U|1004

Current chains

Chain K

18S rRNA

Nearby chains

Chain LL

Small ribosomal subunit protein eS26

Chain MM

Small ribosomal subunit protein uS11

Chain QQ

Ribosomal protein S13

Chain p

eL43

Chain u

40S ribosomal protein S3a