3D structure

PDB id
9O2X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (S)-betahydroxyBocK charged NH-tRNAPyl
Experimental method
ELECTRON MICROSCOPY
Resolution
2.29 Å

Loop

Sequence
CGUCAG*CGCAACC*GAUGACG
Length
20 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9O2X|1|A|C|1063
9O2X|1|A|G|1064
9O2X|1|A|U|1065
9O2X|1|A|C|1066
9O2X|1|A|A|1067
9O2X|1|A|G|1068
*
9O2X|1|A|C|1107
9O2X|1|A|G|1108
9O2X|1|A|C|1109
9O2X|1|A|A|1110
9O2X|1|A|A|1111
9O2X|1|A|C|1112
9O2X|1|A|C|1113
*
9O2X|1|A|G|1187
9O2X|1|A|A|1188
9O2X|1|A|U|1189
9O2X|1|A|G|1190
9O2X|1|A|A|1191
9O2X|1|A|C|1192
9O2X|1|A|G|1193

Current chains

Chain A
16S rRNA

Nearby chains

Chain C
Small ribosomal subunit protein uS3
Chain E
Small ribosomal subunit protein uS5
Chain G
Small ribosomal subunit protein uS7
Chain I
Small ribosomal subunit protein uS9
Chain J
Small ribosomal subunit protein uS10
Chain N
Small ribosomal subunit protein uS14

Coloring options:

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