J3_9O2Y_032

3D structure

PDB id

9O2Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of WT E.coli ribosome 70S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site (R) beta-2-hydroxy-BocLysine acid charged NH-tRNAPyl

Experimental method

ELECTRON MICROSCOPY

Resolution

2.14 Å

Loop

Sequence

CAUC*GUA*UUUAAAG

Length

14 nucleotides

Bulged bases

9O2Y|1|a|A|2518, 9O2Y|1|a|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O2Y|1|a|C|2517
9O2Y|1|a|A|2518
9O2Y|1|a|U|2519
9O2Y|1|a|C|2520
*
9O2Y|1|a|G|2545
9O2Y|1|a|U|2546
9O2Y|1|a|A|2547
*
9O2Y|1|a|U|2561
9O2Y|1|a|U|2562
9O2Y|1|a|U|2563
9O2Y|1|a|A|2564
9O2Y|1|a|A|2565
9O2Y|1|a|A|2566
9O2Y|1|a|G|2567

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

50S ribosomal protein L3

Chain j

Large ribosomal subunit protein uL14