J3_9O3I_066

3D structure

PDB id

9O3I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

9O3I|1|2a|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3I|1|2a|C|990
9O3I|1|2a|U|991
9O3I|1|2a|U|992
9O3I|1|2a|G|993
9O3I|1|2a|A|994
9O3I|1|2a|C|995
9O3I|1|2a|A|996
9O3I|1|2a|U|997
*
9O3I|1|2a|A|1044
9O3I|1|2a|C|1045
9O3I|1|2a|A|1046
9O3I|1|2a|G|1047
*
9O3I|1|2a|C|1210
9O3I|1|2a|U|1211
9O3I|1|2a|U|1212
9O3I|1|2a|A|1213
9O3I|1|2a|C|1214
9O3I|1|2a|G|1215

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2n

30S ribosomal protein S14 type Z