J3_9O3J_019
3D structure
- PDB id
- 9O3J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type drug-free Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- CC*GUGGAU*AAUCG
- Length
- 13 nucleotides
- Bulged bases
- 9O3J|1|1A|G|2833, 9O3J|1|1A|A|2835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9O3J_019 not in the Motif Atlas
- Geometric match to J3_9DFE_019
- Geometric discrepancy: 0.0712
- The information below is about J3_9DFE_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76911.2
- Basepair signature
- cWW-tHS-F-F-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
9O3J|1|1A|C|2814
9O3J|1|1A|C|2815
*
9O3J|1|1A|G|2831
9O3J|1|1A|U|2832
9O3J|1|1A|G|2833
9O3J|1|1A|G|2834
9O3J|1|1A|A|2835
9O3J|1|1A|U|2836
*
9O3J|1|1A|A|2882
9O3J|1|1A|A|2883
9O3J|1|1A|U|2884
9O3J|1|1A|C|2885
9O3J|1|1A|G|2886
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 15
- 50S ribosomal protein L32
- Chain 1E
- 50S ribosomal protein L3
- Chain 1R
- 50S ribosomal protein L17
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