J3_9O3L_060
3D structure
- PDB id
- 9O3L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, deacylated A-site tRNAphe, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAphe at 2.75A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.75 Å
Loop
- Sequence
- UG*CGCCGAUGG*CAG
- Length
- 14 nucleotides
- Bulged bases
- 9O3L|1|2a|U|723
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9O3L_060 not in the Motif Atlas
- Geometric match to J3_4LFB_012
- Geometric discrepancy: 0.1175
- The information below is about J3_4LFB_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11934.4
- Basepair signature
- cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9O3L|1|2a|U|672
9O3L|1|2a|G|673
*
9O3L|1|2a|C|717
9O3L|1|2a|G|718
9O3L|1|2a|C|719
9O3L|1|2a|C|720
9O3L|1|2a|G|721
9O3L|1|2a|A|722
9O3L|1|2a|U|723
9O3L|1|2a|G|724
9O3L|1|2a|G|725
*
9O3L|1|2a|C|732
9O3L|1|2a|A|733
9O3L|1|2a|G|734
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2D
- 50S ribosomal protein L2
- Chain 2f
- 30S ribosomal protein S6
- Chain 2k
- 30S ribosomal protein S11
- Chain 2o
- 30S ribosomal protein S15
- Chain 2r
- 30S ribosomal protein S18
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