J3_9Q6Q_014
3D structure
- PDB id
- 9Q6Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with pleuromutilin-18 triazole derivative and protein Y at 2.90A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- UUG*CUAAC*GGACAG
- Length
- 14 nucleotides
- Bulged bases
- 9Q6Q|1|1A|A|2198
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9Q6Q_014 not in the Motif Atlas
- Homologous match to J3_8B0X_021
- Geometric discrepancy: 0.1099
- The information below is about J3_8B0X_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17460.1
- Basepair signature
- cWW-tHH-cWW-F-tWH-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
9Q6Q|1|1A|U|2091
9Q6Q|1|1A|U|2092
9Q6Q|1|1A|G|2093
*
9Q6Q|1|1A|C|2196
9Q6Q|1|1A|U|2197
9Q6Q|1|1A|A|2198
9Q6Q|1|1A|A|2199
9Q6Q|1|1A|C|2200
*
9Q6Q|1|1A|G|2223
9Q6Q|1|1A|G|2224
9Q6Q|1|1A|A|2225
9Q6Q|1|1A|C|2226
9Q6Q|1|1A|A|2227
9Q6Q|1|1A|G|2228
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 11
- 50S ribosomal protein L28
- Chain 1D
- 50S ribosomal protein L2
- Chain 1I
- 50S ribosomal protein L9
Coloring options: