J3_9QEG_009
3D structure
- PDB id
- 9QEG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- UAAG*CGCAAAC*GUA
- Length
- 14 nucleotides
- Bulged bases
- 9QEG|1|A|A|1653
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9QEG_009 not in the Motif Atlas
- Homologous match to J3_5J7L_042
- Geometric discrepancy: 0.1054
- The information below is about J3_5J7L_042
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_19545.2
- Basepair signature
- cWW-F-F-tHS-cWW-cWW-F-F
- Number of instances in this motif group
- 6
Unit IDs
9QEG|1|A|U|1343
9QEG|1|A|A|1344
9QEG|1|A|A|1345
9QEG|1|A|G|1346
*
9QEG|1|A|C|1649
9QEG|1|A|G|1650
9QEG|1|A|C|1651
9QEG|1|A|A|1652
9QEG|1|A|A|1653
9QEG|1|A|A|1654
9QEG|1|A|C|1655
*
9QEG|1|A|G|1664
9QEG|1|A|U|1665
9QEG|1|A|A|1666
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL34
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