J3_9QEG_022
3D structure
- PDB id
- 9QEG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome of a MLSb sensitive S. aureus strain "KES34" in complex with solithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.21 Å
Loop
- Sequence
- UG*CACCAGUGG*CGA
- Length
- 14 nucleotides
- Bulged bases
- 9QEG|1|Aa|U|731
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9QEG_022 not in the Motif Atlas
- Homologous match to J3_5J7L_003
- Geometric discrepancy: 0.1165
- The information below is about J3_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11934.4
- Basepair signature
- cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9QEG|1|Aa|U|680
9QEG|1|Aa|G|681
*
9QEG|1|Aa|C|725
9QEG|1|Aa|A|726
9QEG|1|Aa|C|727
9QEG|1|Aa|C|728
9QEG|1|Aa|A|729
9QEG|1|Aa|G|730
9QEG|1|Aa|U|731
9QEG|1|Aa|G|732
9QEG|1|Aa|G|733
*
9QEG|1|Aa|C|740
9QEG|1|Aa|G|741
9QEG|1|Aa|A|742
Current chains
- Chain Aa
- 16S ribosomal RNA
Nearby chains
- Chain Af
- Small ribosomal subunit protein bS6
- Chain Ak
- Small ribosomal subunit protein uS11
- Chain Ao
- Small ribosomal subunit protein uS15
- Chain Ar
- Small ribosomal subunit protein bS18
- Chain d
- mRNA molecule
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