J3_9QQA_028
3D structure
- PDB id
- 9QQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ternary complex of translating ribosome, NAC and NMT1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AGAUGG*CGUUCCGAAGGG*CAGCCGA(PSU)
- Length
- 26 nucleotides
- Bulged bases
- 9QQA|1|B5|C|2313, 9QQA|1|B5|A|2315, 9QQA|1|B5|G|2318
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9QQA|1|B5|A|2294
9QQA|1|B5|G|2295
9QQA|1|B5|A|2296
9QQA|1|B5|U|2297
9QQA|1|B5|G|2298
9QQA|1|B5|G|2299
*
9QQA|1|B5|C|2308
9QQA|1|B5|G|2309
9QQA|1|B5|U|2310
9QQA|1|B5|U|2311
9QQA|1|B5|C|2312
9QQA|1|B5|C|2313
9QQA|1|B5|G|2314
9QQA|1|B5|A|2315
9QQA|1|B5|A|2316
9QQA|1|B5|G|2317
9QQA|1|B5|G|2318
9QQA|1|B5|G|2319
*
9QQA|1|B5|C|2344
9QQA|1|B5|A|2345
9QQA|1|B5|G|2346
9QQA|1|B5|C|2347
9QQA|1|B5|C|2348
9QQA|1|B5|G|2349
9QQA|1|B5|A|2350
9QQA|1|B5|PSU|2351
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BA
- Large ribosomal subunit protein uL2
- Chain BG
- 60S ribosomal protein L7a
- Chain BN
- Ribosomal protein L15
- Chain BX
- Large ribosomal subunit protein uL23
- Chain Bj
- Ribosomal protein L37
Coloring options: