J3_9QQB_008

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

CUG*UUCCG*CAAAG

Length

13 nucleotides

Bulged bases

9QQB|1|A2|C|1139, 9QQB|1|A2|A|1151

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQB|1|A2|C|1095
9QQB|1|A2|U|1096
9QQB|1|A2|G|1097
*
9QQB|1|A2|U|1137
9QQB|1|A2|U|1138
9QQB|1|A2|C|1139
9QQB|1|A2|C|1140
9QQB|1|A2|G|1141
*
9QQB|1|A2|C|1148
9QQB|1|A2|A|1149
9QQB|1|A2|A|1150
9QQB|1|A2|A|1151
9QQB|1|A2|G|1152

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AA

Small ribosomal subunit protein eS27

Chain AE

eS26

Chain AZ

Small ribosomal subunit protein uS2

Chain Au

Small ribosomal subunit protein eS21

Chain Av

Small ribosomal subunit protein uS8