J3_9QQB_013

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

UCUUAG*CGAGAC*GCAAUA

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQB|1|A2|U|1341
9QQB|1|A2|C|1342
9QQB|1|A2|U|1343
9QQB|1|A2|U|1344
9QQB|1|A2|A|1345
9QQB|1|A2|G|1346
*
9QQB|1|A2|C|1385
9QQB|1|A2|G|1386
9QQB|1|A2|A|1387
9QQB|1|A2|G|1388
9QQB|1|A2|A|1389
9QQB|1|A2|C|1390
*
9QQB|1|A2|G|1482
9QQB|1|A2|C|1483
9QQB|1|A2|A|1484
9QQB|1|A2|A|1485
9QQB|1|A2|U|1486
9QQB|1|A2|A|1487

Current chains

Chain A2

18S rRNA

Nearby chains

Chain AG

Small ribosomal subunit protein uS14

Chain Ab

40S ribosomal protein S2

Chain Ac

40S ribosomal protein S3

Chain Ap

Small ribosomal subunit protein uS9

Chain Aq

Small ribosomal subunit protein eS17

Chain At

Small ribosomal subunit protein uS10