J3_9QQB_030

3D structure

PDB id

9QQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Quaternary complex of a translating ribosome, NAC, NMT1, and NatA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.43 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

9QQB|1|B5|U|2397, 9QQB|1|B5|U|2606

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQB|1|B5|A|2394
9QQB|1|B5|G|2395
9QQB|1|B5|A|2396
9QQB|1|B5|U|2397
9QQB|1|B5|G|2398
*
9QQB|1|B5|C|2415
9QQB|1|B5|A|2416
9QQB|1|B5|G|2417
9QQB|1|B5|U|2418
*
9QQB|1|B5|A|2600
9QQB|1|B5|G|2601
9QQB|1|B5|G|2602
9QQB|1|B5|G|2603
9QQB|1|B5|U|2604
9QQB|1|B5|G|2605
9QQB|1|B5|U|2606
9QQB|1|B5|A|2607
9QQB|1|B5|A|2608
9QQB|1|B5|A|2609
9QQB|1|B5|U|2610

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BZ

60S ribosomal protein L27