J3_9R3A_004
3D structure
- PDB id
- 9R3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CGG*CUUGA*UGACG
- Length
- 13 nucleotides
- Bulged bases
- 9R3A|1|A|U|627
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9R3A_004 not in the Motif Atlas
- Homologous match to J3_6CZR_077
- Geometric discrepancy: 0.1578
- The information below is about J3_6CZR_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.3
- Basepair signature
- cWW-F-cWW-cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
9R3A|1|A|C|560
9R3A|1|A|G|561
9R3A|1|A|G|562
*
9R3A|1|A|C|625
9R3A|1|A|U|626
9R3A|1|A|U|627
9R3A|1|A|G|628
9R3A|1|A|A|629
*
9R3A|1|A|U|725
9R3A|1|A|G|726
9R3A|1|A|A|727
9R3A|1|A|C|728
9R3A|1|A|G|729
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain H
- Small ribosomal subunit protein uS8
- Chain L
- Small ribosomal subunit protein uS12
- Chain O
- Small ribosomal subunit protein uS15
- Chain Q
- Small ribosomal subunit protein uS17
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