J3_9R3A_007
3D structure
- PDB id
- 9R3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CAAG*CUAGUAA*UGAAUACG
- Length
- 19 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9R3A_007 not in the Motif Atlas
- Homologous match to J3_6CZR_061
- Geometric discrepancy: 0.1344
- The information below is about J3_6CZR_061
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_25303.3
- Basepair signature
- cWW-tSH-cSS-F-cWW-cSS-tWW-tHH-tWH-tHS-cSH-cWW
- Number of instances in this motif group
- 5
Unit IDs
9R3A|1|A|C|910
9R3A|1|A|A|911
9R3A|1|A|A|912
9R3A|1|A|G|913
*
9R3A|1|A|C|1318
9R3A|1|A|U|1319
9R3A|1|A|A|1320
9R3A|1|A|G|1321
9R3A|1|A|U|1322
9R3A|1|A|A|1323
9R3A|1|A|A|1324
*
9R3A|1|A|U|1346
9R3A|1|A|G|1347
9R3A|1|A|A|1348
9R3A|1|A|A|1349
9R3A|1|A|U|1350
9R3A|1|A|A|1351
9R3A|1|A|C|1352
9R3A|1|A|G|1353
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain G
- Small ribosomal subunit protein uS7
- Chain I
- Small ribosomal subunit protein uS9
Coloring options: