J3_9R3A_011

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

9R3A|1|A|C|1188

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_9R3A_011 not in the Motif Atlas

Homologous match to J3_6CZR_063

Geometric discrepancy: 0.1899

The information below is about J3_6CZR_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.1

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

3

Unit IDs

9R3A|1|A|C|964
9R3A|1|A|U|965
9R3A|1|A|U|966
9R3A|1|A|G|967
9R3A|1|A|A|968
9R3A|1|A|C|969
9R3A|1|A|A|970
9R3A|1|A|U|971
*
9R3A|1|A|A|1018
9R3A|1|A|C|1019
9R3A|1|A|A|1020
9R3A|1|A|G|1021
*
9R3A|1|A|C|1184
9R3A|1|A|U|1185
9R3A|1|A|U|1186
9R3A|1|A|A|1187
9R3A|1|A|C|1188
9R3A|1|A|G|1189

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

Small ribosomal subunit protein uS14