J3_9R3A_014

3D structure

PDB id

9R3A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

UG*UGUU*GCAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_9R3A_014 not in the Motif Atlas

Homologous match to J3_6CZR_079

Geometric discrepancy: 0.1768

The information below is about J3_6CZR_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_89145.1

Basepair signature

cWW-tSS-F-cWW-F-cWW-F

Number of instances in this motif group

2

Unit IDs

9R3A|1|A|U|1047
9R3A|1|A|G|1048
*
9R3A|1|A|U|1057
9R3A|1|A|G|1058
9R3A|1|A|U|1059
9R3A|1|A|U|1060
*
9R3A|1|A|G|1073
9R3A|1|A|C|1074
9R3A|1|A|A|1075
9R3A|1|A|A|1076

Current chains

Chain A

16S rRNA

Nearby chains

Chain E

Small ribosomal subunit protein uS5

Chain U

Small ribosomal subunit protein bS21

Chain V

Small ribosomal subunit protein uS2