J3_9R3A_017
3D structure
- PDB id
- 9R3A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent Chain
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CAAUG*CGUAGUCC*GUCG
- Length
- 17 nucleotides
- Bulged bases
- 9R3A|1|A|U|1214, 9R3A|1|A|C|1276
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_9R3A_017 not in the Motif Atlas
- Homologous match to J3_6CZR_026
- Geometric discrepancy: 0.16
- The information below is about J3_6CZR_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_37047.5
- Basepair signature
- cWW-cSS-tHW-F-F-F-cWW-cWW-cSH-cSH-F
- Number of instances in this motif group
- 5
Unit IDs
9R3A|1|A|C|1211
9R3A|1|A|A|1212
9R3A|1|A|A|1213
9R3A|1|A|U|1214
9R3A|1|A|G|1215
*
9R3A|1|A|C|1270
9R3A|1|A|G|1271
9R3A|1|A|U|1272
9R3A|1|A|A|1273
9R3A|1|A|G|1274
9R3A|1|A|U|1275
9R3A|1|A|C|1276
9R3A|1|A|C|1277
*
9R3A|1|A|G|1308
9R3A|1|A|U|1309
9R3A|1|A|C|1310
9R3A|1|A|G|1311
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain G
- Small ribosomal subunit protein uS7
- Chain M
- Small ribosomal subunit protein uS13
Coloring options: